BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024F08SP1|AL428252
(904 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1775 1767 0.0
>3x_Contig1775
Length = 26320
Score = 1767 bits (889), Expect = 0.0
Identities = 900/905 (99%), Gaps = 1/905 (0%)
Strand = Plus / Plus
Query: 1 gatctactgctactattgctatgaaccatgccactcagaccactaccaagactgctgtta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12851 gatctactgctactattgctatgaaccatgccactcagaccactaccaagactgctgtta 12910
Query: 61 gatctgggagaagagtcggagaagcttgggctgtcactgaagccagaagattgggaccaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12911 gatctgggagaagagtcggagaagcttgggctgtcactgaagccagaagattgggaccaa 12970
Query: 121 ccattctaatgtacggtaccttcatcgtttctgtgttaggctggccattccttgtcagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12971 ccattctaatgtacggtaccttcatcgtttctgtgttaggctggccattccttgtcagaa 13030
Query: 181 aggctgatatggatattggaatccacgggatgaagcaataaatattgtgatgaaagtttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13031 aggctgatatggatattggaatccacgggatgaagcaataaatattgtgatgaaagtttt 13090
Query: 241 caaaacctcatcagagatacaaatattatattgcattggcagtggctcatatataaacgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13091 caaaacctcatcagagatacaaatattatattgcattggcagtggctcatatataaacgg 13150
Query: 301 tttaccaacttcaagatgagctaatatgtyaaccttattatcacctatattcttcgcaat 360
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 13151 tttaccaacttcaagatgagctaatatgtcaaccttattatcacctatattcttcgcaat 13210
Query: 361 tccatgctatccatgaaaatgtacaataagcaaagaaagaaaaaataaattcaagaacta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13211 tccatgctatccatgaaaatgtacaataagcaaagaaagaaaaaataaattcaagaacta 13270
Query: 421 cctcaacagttaattccactactttacactatcaaattgcgctacagatatgtwaataca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 13271 cctcaacagttaattccactactttacactatcaaattgcgctacagatatgtaaataca 13330
Query: 481 gatatgtaaattaataatgatttadatgacattcagaaaacctacctcacgttccgtact 540
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 13331 gatatgtaaattaataatgatttaaatgacattcagaaaacctacctcacgttccgtact 13390
Query: 541 aaccttctttacagtcttttgtttgctctcaccattttttgatgcgtttttttacaagct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13391 aaccttctttacagtcttttgtttgctctcaccattttttgatgcgtttttttacaagct 13450
Query: 601 gcgtcagtttgcttaggtaatccagaaattggcaattctcgtacaccgcatacttaatgc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13451 gcgtcagtttgcttaggtaatccagaaattggcaattctcgtacaccgcatacttaatgc 13510
Query: 661 atgttatgtcgagggtggagaggatgcaggggcagcctcacaaccagagtgagacttatt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13511 atgttatgtcgagggtggagaggatgcaggggcagcctcacaaccagagtgagacttatt 13570
Query: 721 cagaaagactgaaccacataattggctgtcagtattaagtaatattatgtgtc-acttta 779
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 13571 cagaaagactgaaccacataattggctgtcagtattaagtaatattatgtgtcaacttta 13630
Query: 780 ctaagattgggggatatcggtcttctatttgtggatcgtcctttaccccagcactatccc 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13631 ctaagattgggggatatcggtcttctatttgtggatcgtcctttaccccagcactatccc 13690
Query: 840 tctttgaactgctcgctgcttctcaacgttcttccggctaatagcaagtwccgcagtaca 899
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 13691 tctttgaactgctcgctgcttctcaacgttcttccggctaatagcaagtaccgcagtaca 13750
Query: 900 taggg 904
|||||
Sbjct: 13751 taggg 13755
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6240
Number of Sequences: 1807
Number of extensions: 6240
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 904
length of database: 10,358,551
effective HSP length: 16
effective length of query: 888
effective length of database: 10,329,639
effective search space: 9172719432
effective search space used: 9172719432
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)